STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ10736.1PFAM: HTH transcriptional regulator, LysR; KEGG: mru:mru_0249 transcriptional regulator LysR family. (292 aa)    
Predicted Functional Partners:
ADZ08727.1
PFAM: PhoU; KEGG: mmg:MTBMA_c03000 phosphate transport system regulator.
 
  
 0.790
ADZ10737.1
PfkB domain protein; PFAM: Carbohydrate/purine kinase; KEGG: mth:MTH1544 ribokinase; Belongs to the carbohydrate kinase PfkB family.
 
   
 0.780
ADZ09011.1
TIGRFAM: Pyridoxal phosphate-dependent transferase, archaea; KEGG: msi:Msm_0767 selenocysteine synthase, SelA.
 
   
 0.765
ADZ10163.1
KEGG: mst:Msp_0375 hypothetical protein.
  
     0.707
ADZ08846.1
PFAM: tRNA-specific 2-thiouridylase; KEGG: mru:mru_1475 hypothetical protein.
  
     0.669
ADZ10382.1
PFAM: RDD; KEGG: mfv:Mfer_1285 rdd domain containing protein.
 
   
 0.664
ADZ08291.1
PFAM: Nucleotidyl transferase; KEGG: mmg:MTBMA_c01060 nucleotidyl transferase.
  
  
 0.661
ADZ09210.1
KEGG: mmg:MTBMA_c06320 hypothetical protein.
  
     0.655
ADZ10274.1
KEGG: mmg:MTBMA_c02300 MurG-related protein.
  
     0.654
ADZ10556.1
PFAM: Mur ligase, central; KEGG: mfv:Mfer_1205 mur ligase middle domain protein.
 
  
 0.654
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.