STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ10741.1KEGG: mmg:MTBMA_c01260 hypothetical protein. (388 aa)    
Predicted Functional Partners:
ADZ10740.1
KEGG: mmg:MTBMA_c01270 hypothetical protein.
       0.843
ADZ10027.1
APHP domain protein; PFAM: APHP; KEGG: mmg:MTBMA_c13780 hypothetical protein.
  
     0.654
lysS
PFAM: Lysyl-tRNA synthetase, class Ic; TIGRFAM: Lysyl-tRNA synthetase, class I; HAMAP: Lysyl-tRNA synthetase, class I, archaeal-type; KEGG: mth:MTH1542 hypothetical protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.641
ADZ08986.1
KEGG: mmg:MTBMA_c04730 hypothetical protein.
  
     0.583
ADZ10048.1
PFAM: Peptidase C60, sortase A/B; KEGG: mmg:MTBMA_c03990 sortase related protein.
  
     0.572
ADZ08996.1
KEGG: mfv:Mfer_0701 hypothetical protein.
  
     0.528
ADZ08402.1
PFAM: ABC-2 type transporter; KEGG: mmg:MTBMA_c17580 ABC transporter, permease component.
  
     0.506
ADZ08584.1
KEGG: mth:MTH1192 hypothetical protein.
  
     0.499
ADZ08894.1
PFAM: Peptidase C60, sortase A/B; KEGG: mth:MTH1829 hypothetical protein.
  
     0.473
ADZ08989.1
PFAM: Uncharacterised conserved protein UCP004977; KEGG: mmg:MTBMA_c04760 hypothetical protein.
  
     0.458
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
Server load: medium (68%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.