Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CRV06_03790 | CRV06_03800 | GCA_000935065_02880 | GCA_000935065_02878 | Unannotated protein. | Unannotated protein. | 0.746 |
CRV06_03790 | GCA_000935065_02877 | GCA_000935065_02880 | GCA_000935065_02877 | Unannotated protein. | Unannotated protein. | 0.746 |
CRV06_03790 | coaE | GCA_000935065_02880 | GCA_000935065_02875 | Unannotated protein. | Unannotated protein; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.746 |
CRV06_03790 | dapF | GCA_000935065_02880 | GCA_000935065_02876 | Unannotated protein. | Unannotated protein; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.746 |
CRV06_03790 | purT | GCA_000935065_02880 | GCA_000935065_02879 | Unannotated protein. | Unannotated protein; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family. | 0.773 |
CRV06_03800 | CRV06_03790 | GCA_000935065_02878 | GCA_000935065_02880 | Unannotated protein. | Unannotated protein. | 0.746 |
CRV06_03800 | GCA_000935065_02877 | GCA_000935065_02878 | GCA_000935065_02877 | Unannotated protein. | Unannotated protein. | 0.773 |
CRV06_03800 | coaE | GCA_000935065_02878 | GCA_000935065_02875 | Unannotated protein. | Unannotated protein; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.804 |
CRV06_03800 | dapF | GCA_000935065_02878 | GCA_000935065_02876 | Unannotated protein. | Unannotated protein; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.804 |
CRV06_03800 | purT | GCA_000935065_02878 | GCA_000935065_02879 | Unannotated protein. | Unannotated protein; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family. | 0.755 |
GCA_000935065_02877 | CRV06_03790 | GCA_000935065_02877 | GCA_000935065_02880 | Unannotated protein. | Unannotated protein. | 0.746 |
GCA_000935065_02877 | CRV06_03800 | GCA_000935065_02877 | GCA_000935065_02878 | Unannotated protein. | Unannotated protein. | 0.773 |
GCA_000935065_02877 | coaE | GCA_000935065_02877 | GCA_000935065_02875 | Unannotated protein. | Unannotated protein; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.773 |
GCA_000935065_02877 | dapF | GCA_000935065_02877 | GCA_000935065_02876 | Unannotated protein. | Unannotated protein; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.773 |
GCA_000935065_02877 | purT | GCA_000935065_02877 | GCA_000935065_02879 | Unannotated protein. | Unannotated protein; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family. | 0.746 |
acpS | coaE | GCA_000935065_01577 | GCA_000935065_02875 | Unannotated protein; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family. | Unannotated protein; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.901 |
coaBC | coaD | GCA_000935065_03369 | GCA_000935065_02593 | Unannotated protein; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | Unannotated protein; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.902 |
coaBC | coaE | GCA_000935065_03369 | GCA_000935065_02875 | Unannotated protein; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | Unannotated protein; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.793 |
coaD | coaBC | GCA_000935065_02593 | GCA_000935065_03369 | Unannotated protein; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | Unannotated protein; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | 0.902 |
coaD | coaE | GCA_000935065_02593 | GCA_000935065_02875 | Unannotated protein; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | Unannotated protein; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.936 |
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