STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDC3Enhancer of mRNA decapping 3. (516 aa)    
Predicted Functional Partners:
DDX6
DEAD-box helicase 6.
   
 0.999
DCP1B
Decapping mRNA 1B.
   
 0.991
DCP1A
Decapping mRNA 1A.
   
 0.987
DCP2
Decapping mRNA 2.
  
 0.987
EDC4
Enhancer of mRNA decapping 4.
   
 0.971
PATL1
PAT1 homolog 1, processing body mRNA decay factor.
    
 0.969
PATL2
PAT1 homolog 2.
    
 0.969
NAXD
NAD(P)HX dehydratase.
  
 
 0.926
TTL
Tubulin tyrosine ligase.
    
 
 0.913
TTLL1
Tubulin tyrosine ligase like 1.
    
 
 0.913
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.