STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTULINOTU deubiquitinase with linear linkage specificity. (535 aa)    
Predicted Functional Partners:
SHARPIN
SHANK associated RH domain interactor.
    
 0.983
SNX27
Sorting nexin 27.
    
 
 0.952
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.942
RPS27A
Ribosomal protein S27a.
    
  0.939
ARIH2
Ariadne RBR E3 ubiquitin protein ligase 2.
    
 0.844
RNF216
Ring finger protein 216.
    
 0.844
ENSDNVP00000001070
annotation not available
    
  0.814
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
    
  0.722
OASL
2'-5'-oligoadenylate synthase 1-like.
    
  0.722
ZFAND4
Zinc finger AN1-type containing 4.
    
  0.722
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.