STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FNTAFarnesyltransferase, CAAX box, alpha. (356 aa)    
Predicted Functional Partners:
PGGT1B
Protein geranylgeranyltransferase type I subunit beta.
    
 0.999
LOC112993459
Protein farnesyltransferase subunit beta-like.
    
 0.990
CHURC1
Churchill domain containing 1.
    
 0.986
ZMPSTE24
Zinc metallopeptidase STE24.
     
 0.926
DHDDS
Dehydrodolichyl diphosphate synthase subunit.
     
 0.916
GGPS1
Geranylgeranyl diphosphate synthase 1.
     
 0.915
FDFT1
Farnesyl-diphosphate farnesyltransferase 1.
     
 0.903
NUS1
NUS1 dehydrodolichyl diphosphate synthase subunit.
     
 0.893
PDSS1
Decaprenyl diphosphate synthase subunit 1.
     
 0.879
FDPS
Farnesyl diphosphate synthase.
     
 0.879
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.