Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PKIGcAMP-dependent protein kinase inhibitor gamma. (76 aa)    
Predicted Functional Partners:
PKIA
cAMP-dependent protein kinase inhibitor alpha.
      
 0.875
PRKACB
Protein kinase cAMP-activated catalytic subunit beta.
    
 
 0.849
PHF13
PHD finger protein 13.
      
 0.587
PRKX
Protein kinase X-linked.
    
 
 0.580
TTPAL
Alpha tocopherol transfer protein like.
      
 0.575
CSTF1
Cleavage stimulation factor subunit 1.
      
 0.570
FAM171B
Family with sequence similarity 171 member B.
      
 0.564
ADA
Adenosine deaminase.
      
 0.561
LOC112980183
PHD finger protein 13-like.
      
 0.468
SERINC3
Serine incorporator 3.
      
 0.465
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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