STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYOCMyocilin. (390 aa)    
Predicted Functional Partners:
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
  0.630
WDR36
WD repeat domain 36.
      
 0.593
FBN1
Fibrillin 1.
   
 
 0.587
OPTN
Optineurin.
      
 0.542
CYP1B1
Cytochrome P450 1B1.
      
 0.537
OPTC
Opticin.
    
 0.527
LINGO1
Leucine rich repeat and Ig domain containing 1.
    
 0.527
MFAP5
Microfibril associated protein 5.
   
  
 0.454
TENM4
Teneurin transmembrane protein 4.
    
 
 0.446
TSKU
Tsukushi, small leucine rich proteoglycan.
    
 0.429
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.