Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BLM | BRCA1 | ENSDNVP00000010898 | ENSDNVP00000027056 | BLM RecQ like helicase. | BRCA1 DNA repair associated. | 0.905 |
BLM | EXO1 | ENSDNVP00000010898 | ENSDNVP00000011786 | BLM RecQ like helicase. | Exonuclease 1. | 0.990 |
BLM | MLH1 | ENSDNVP00000010898 | ENSDNVP00000001745 | BLM RecQ like helicase. | mutL homolog 1. | 0.984 |
BLM | MLH3 | ENSDNVP00000010898 | ENSDNVP00000002949 | BLM RecQ like helicase. | mutL homolog 3. | 0.762 |
BLM | MSH2 | ENSDNVP00000010898 | ENSDNVP00000023729 | BLM RecQ like helicase. | mutS homolog 2. | 0.834 |
BLM | MSH3 | ENSDNVP00000010898 | ENSDNVP00000019459 | BLM RecQ like helicase. | mutS homolog 3. | 0.676 |
BLM | MSH4 | ENSDNVP00000010898 | ENSDNVP00000018036 | BLM RecQ like helicase. | mutS homolog 4. | 0.827 |
BLM | MSH6 | ENSDNVP00000010898 | ENSDNVP00000001533 | BLM RecQ like helicase. | mutS homolog 6. | 0.905 |
BLM | PMS1 | ENSDNVP00000010898 | ENSDNVP00000000027 | BLM RecQ like helicase. | PMS1 homolog 1, mismatch repair system component. | 0.657 |
BLM | PMS2 | ENSDNVP00000010898 | ENSDNVP00000013213 | BLM RecQ like helicase. | PMS1 homolog 2, mismatch repair system component. | 0.710 |
BRCA1 | BLM | ENSDNVP00000027056 | ENSDNVP00000010898 | BRCA1 DNA repair associated. | BLM RecQ like helicase. | 0.905 |
BRCA1 | EXO1 | ENSDNVP00000027056 | ENSDNVP00000011786 | BRCA1 DNA repair associated. | Exonuclease 1. | 0.895 |
BRCA1 | MLH1 | ENSDNVP00000027056 | ENSDNVP00000001745 | BRCA1 DNA repair associated. | mutL homolog 1. | 0.988 |
BRCA1 | MLH3 | ENSDNVP00000027056 | ENSDNVP00000002949 | BRCA1 DNA repair associated. | mutL homolog 3. | 0.946 |
BRCA1 | MSH2 | ENSDNVP00000027056 | ENSDNVP00000023729 | BRCA1 DNA repair associated. | mutS homolog 2. | 0.984 |
BRCA1 | MSH3 | ENSDNVP00000027056 | ENSDNVP00000019459 | BRCA1 DNA repair associated. | mutS homolog 3. | 0.949 |
BRCA1 | MSH4 | ENSDNVP00000027056 | ENSDNVP00000018036 | BRCA1 DNA repair associated. | mutS homolog 4. | 0.668 |
BRCA1 | MSH6 | ENSDNVP00000027056 | ENSDNVP00000001533 | BRCA1 DNA repair associated. | mutS homolog 6. | 0.978 |
BRCA1 | PMS1 | ENSDNVP00000027056 | ENSDNVP00000000027 | BRCA1 DNA repair associated. | PMS1 homolog 1, mismatch repair system component. | 0.952 |
BRCA1 | PMS2 | ENSDNVP00000027056 | ENSDNVP00000013213 | BRCA1 DNA repair associated. | PMS1 homolog 2, mismatch repair system component. | 0.967 |
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