STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SACM1LSAC1 like phosphatidylinositide phosphatase. (595 aa)    
Predicted Functional Partners:
SYNJ1
Synaptojanin-1-like.
 
  
 0.990
INPP5B
Inositol polyphosphate-5-phosphatase B.
 
  
 0.988
INPP5E
Inositol polyphosphate-5-phosphatase E.
 
  
 0.985
OCRL
OCRL inositol polyphosphate-5-phosphatase.
 
  
 0.981
PI4KA
Phosphatidylinositol 4-kinase alpha.
    
 0.970
SPTLC1
Serine palmitoyltransferase long chain base subunit 1.
   
 0.966
INPP5K
Inositol polyphosphate-5-phosphatase K.
 
  
 0.946
PI4KB
Phosphatidylinositol 4-kinase beta.
    
 0.933
GOLPH3L
Golgi phosphoprotein 3 like.
    
 
 0.925
GOLPH3
Golgi phosphoprotein 3.
    
 
 0.925
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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