STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112983246Centrin-2-like. (103 aa)    
Predicted Functional Partners:
UBE2V1
Ubiquitin-conjugating enzyme E2 variant 1.
   
 
 0.975
RANBP2
E3 SUMO-protein ligase RanBP2-like.
  
 0.945
XPC
XPC complex subunit, DNA damage recognition and repair factor.
    
 0.907
MCM3AP
Minichromosome maintenance complex component 3 associated protein.
    
 0.906
ENY2
ENY2 transcription and export complex 2 subunit.
   
 0.905
PCID2
PCI domain containing 2.
    
 0.870
LOC112992288
Peripheral plasma membrane protein CASK.
    
 0.823
ENSDNVP00000027636
annotation not available
    
 0.823
ENSDNVP00000027637
annotation not available
    
 0.823
NUP153
Nucleoporin 153.
    
 0.804
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.