STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSDNVP00000003603annotation not available (250 aa)    
Predicted Functional Partners:
ENSDNVP00000017241
annotation not available
 
      0.900
ENSDNVP00000006241
annotation not available
 
      0.831
COL8A2
Collagen type VIII alpha 2 chain.
 
      0.750
COL13A1
Collagen type XIII alpha 1 chain.
 
      0.732
COL19A1
Collagen type XIX alpha 1 chain.
 
      0.684
COL9A3
Collagen type IX alpha 3 chain.
 
      0.618
COL8A1
Collagen type VIII alpha 1 chain.
 
      0.588
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.565
COL22A1
Collagen type XXII alpha 1 chain.
 
  
  0.547
C1QC
Complement C1q C chain.
    
  0.539
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.