STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112979716Homeobox protein VENTX-like. (313 aa)    
Predicted Functional Partners:
PBX1
PBX homeobox 1.
    
 0.524
PBX4
PBX homeobox 4.
    
 0.524
PBX3
PBX homeobox 3.
    
 0.524
ENSDNVP00000018883
annotation not available
    
 0.524
LOC112997050
Uncharacterized LOC112997050.
  
 
   0.434
NR5A2
Nuclear receptor subfamily 5 group A member 2.
    
 0.417
NR5A1
Nuclear receptor subfamily 5 group A member 1.
    
 0.417
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.