STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TYW5tRNA-yW synthesizing protein 5. (159 aa)    
Predicted Functional Partners:
USE1
Unconventional SNARE in the ER 1.
    
   0.894
TRMT5
tRNA methyltransferase 5.
      
 0.793
C2orf69
Chromosome unknown C2orf69 homolog.
      
 0.692
TYW1
tRNA-yW synthesizing protein 1 homolog.
      
 0.692
RIOX2
Ribosomal oxygenase 2.
      
 0.692
TYW3
tRNA-yW synthesizing protein 3 homolog.
      
 0.680
RPS6
Ribosomal protein S6.
    
  0.647
JMJD8
Jumonji domain containing 8.
      
 0.639
RPL27A
Ribosomal protein L27a.
      
 0.616
SLC38A7
Solute carrier family 38 member 7.
      
 0.612
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.