STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDK5RAP3CDK5 regulatory subunit associated protein 3. (540 aa)    
Predicted Functional Partners:
UFL1
UFM1 specific ligase 1.
   
 
 0.959
FKBP6
FKBP prolyl isomerase 6.
    
   0.720
UFC1
Ubiquitin-fold modifier conjugating enzyme 1.
   
 
 0.618
UFSP2
UFM1 specific peptidase 2.
   
  
 0.551
SNX11
Sorting nexin 11.
      
 0.524
UBA5
Ubiquitin like modifier activating enzyme 5.
      
 0.519
UFM1
Ubiquitin fold modifier 1.
    
 
 0.472
CDK5
Cyclin dependent kinase 5.
      
 0.432
SRRM1
Serine and arginine repetitive matrix 1.
      
 0.416
TTLL6
Tubulin tyrosine ligase like 6.
      
 0.416
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.