STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDZK1PDZ domain containing 1. (510 aa)    
Predicted Functional Partners:
AKAP10
A-kinase anchoring protein 10.
    
 
 0.906
MAGI3
Membrane associated guanylate kinase, WW and PDZ domain containing 3.
    
0.769
CFTR
CF transmembrane conductance regulator.
   
 0.760
PDZK1IP1
PDZK1 interacting protein 1.
    
 
 0.703
SCARB1
Scavenger receptor class B member 1.
   
 
 0.668
IFT57
Intraflagellar transport 57.
    
 0.637
IFT80
Intraflagellar transport 80.
    
 0.632
TRAF3IP1
TRAF3 interacting protein 1.
    
 0.623
LOC112992288
Peripheral plasma membrane protein CASK.
    
 0.616
ENSDNVP00000027636
annotation not available
    
 0.616
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.