STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF839Zinc finger protein 839. (907 aa)    
Predicted Functional Partners:
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
   
  0.965
FREM1
FRAS1 related extracellular matrix 1.
    
 0.735
FRAS1
Fraser extracellular matrix complex subunit 1.
    
 0.711
ASF1A
Anti-silencing function 1A histone chaperone.
    
 0.624
GLE1
GLE1 RNA export mediator.
    
 0.594
RPS21
Ribosomal protein S21.
   
  0.594
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.590
RPS2
Ribosomal protein S2.
   
  0.562
RPSA
Ribosomal protein SA.
   
  0.555
RPS11
Ribosomal protein S11.
   
 0.554
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.