STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM8A1Protein FAM8A1. (160 aa)    
Predicted Functional Partners:
SEL1L
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
    
 0.975
AMFR
Autocrine motility factor receptor.
    
 0.920
ENSDNVP00000022130
annotation not available
    
 0.920
SEL1L3
SEL1L family member 3.
    
 0.855
ERLEC1
Endoplasmic reticulum lectin 1.
    
 0.849
DERL1
Derlin 1.
   
 
 0.769
ENSDNVP00000022699
annotation not available
    
 0.744
DERL3
Derlin 3.
   
 
 0.741
RNF145
Ring finger protein 145.
    
 0.725
LOC112995195
RING finger protein 145-like.
    
 0.725
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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