RCOR1 protein (Dromaius novaehollandiae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

RCOR1

REST corepressor 1. (388 aa)

Predicted Functional Partners:

KDM1A

0.999

PHF21A

0.987

ARID4B

0.976

ARID4A

0.976

REST

0.970

HMG20B

0.958

STN1

0.953

TRIP4

0.953

MSH6

0.920

PMS2

0.919

Your Current Organism:

Dromaius novaehollandiae

NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARID4A	ARID4B	ENSDNVP00000012801	ENSDNVP00000004566	AT-rich interaction domain 4A.	AT-rich interaction domain 4B.	0.904
ARID4A	HMG20B	ENSDNVP00000012801	ENSDNVP00000007965	AT-rich interaction domain 4A.	High mobility group 20B.	0.674
ARID4A	KDM1A	ENSDNVP00000012801	ENSDNVP00000007918	AT-rich interaction domain 4A.	Lysine demethylase 1A.	0.731
ARID4A	PHF21A	ENSDNVP00000012801	ENSDNVP00000015315	AT-rich interaction domain 4A.	PHD finger protein 21A.	0.780
ARID4A	RCOR1	ENSDNVP00000012801	ENSDNVP00000006707	AT-rich interaction domain 4A.	REST corepressor 1.	0.976
ARID4A	REST	ENSDNVP00000012801	ENSDNVP00000020102	AT-rich interaction domain 4A.	RE1 silencing transcription factor.	0.645
ARID4B	ARID4A	ENSDNVP00000004566	ENSDNVP00000012801	AT-rich interaction domain 4B.	AT-rich interaction domain 4A.	0.904
ARID4B	HMG20B	ENSDNVP00000004566	ENSDNVP00000007965	AT-rich interaction domain 4B.	High mobility group 20B.	0.694
ARID4B	KDM1A	ENSDNVP00000004566	ENSDNVP00000007918	AT-rich interaction domain 4B.	Lysine demethylase 1A.	0.731
ARID4B	PHF21A	ENSDNVP00000004566	ENSDNVP00000015315	AT-rich interaction domain 4B.	PHD finger protein 21A.	0.780
ARID4B	RCOR1	ENSDNVP00000004566	ENSDNVP00000006707	AT-rich interaction domain 4B.	REST corepressor 1.	0.976
ARID4B	REST	ENSDNVP00000004566	ENSDNVP00000020102	AT-rich interaction domain 4B.	RE1 silencing transcription factor.	0.689
HMG20B	ARID4A	ENSDNVP00000007965	ENSDNVP00000012801	High mobility group 20B.	AT-rich interaction domain 4A.	0.674
HMG20B	ARID4B	ENSDNVP00000007965	ENSDNVP00000004566	High mobility group 20B.	AT-rich interaction domain 4B.	0.694
HMG20B	KDM1A	ENSDNVP00000007965	ENSDNVP00000007918	High mobility group 20B.	Lysine demethylase 1A.	0.968
HMG20B	PHF21A	ENSDNVP00000007965	ENSDNVP00000015315	High mobility group 20B.	PHD finger protein 21A.	0.964
HMG20B	RCOR1	ENSDNVP00000007965	ENSDNVP00000006707	High mobility group 20B.	REST corepressor 1.	0.958
HMG20B	REST	ENSDNVP00000007965	ENSDNVP00000020102	High mobility group 20B.	RE1 silencing transcription factor.	0.660
KDM1A	ARID4A	ENSDNVP00000007918	ENSDNVP00000012801	Lysine demethylase 1A.	AT-rich interaction domain 4A.	0.731
KDM1A	ARID4B	ENSDNVP00000007918	ENSDNVP00000004566	Lysine demethylase 1A.	AT-rich interaction domain 4B.	0.731