STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPIBactericidal permeability increasing protein. (495 aa)    
Predicted Functional Partners:
LY96
Lymphocyte antigen 96.
     
 0.722
CDK5RAP1
CDK5 regulatory subunit associated protein 1.
 
  
 
 0.696
TLR4
Toll like receptor 4.
   
 
 0.636
APOA1
Apolipoprotein A-I.
     
 0.493
CLUL1
Clusterin like 1.
     
 0.491
LOC112978930
Serum amyloid A protein.
     
 0.488
SYS1
SYS1 golgi trafficking protein.
     
 0.459
APOF
Apolipoprotein F.
     
 0.457
ITGB1
Integrin subunit beta 1.
   
 
  0.418
ITGB2
Integrin subunit beta 2.
   
 
  0.418
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.