STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSDNVP00000006967annotation not available (174 aa)    
Predicted Functional Partners:
RANBP2
E3 SUMO-protein ligase RanBP2-like.
   
 
  0.974
UPF2
UPF2 regulator of nonsense mediated mRNA decay.
   
 0.950
UPF1
UPF1 RNA helicase and ATPase.
    
 0.936
EIF4A3
Eukaryotic translation initiation factor 4A3.
   
 0.935
RBM8A
RNA binding motif protein 8A.
    
 0.931
SMG5
SMG5 nonsense mediated mRNA decay factor.
   
 0.924
CASC3
CASC3 exon junction complex subunit.
    
 0.920
RNPS1
RNA binding protein with serine rich domain 1.
    
 0.918
ENSDNVP00000000667
annotation not available
    
 0.915
SRRM1
Serine and arginine repetitive matrix 1.
    
 0.909
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.