STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL4A1Collagen type IV alpha 1 chain. (1644 aa)    
Predicted Functional Partners:
ITGB1
Integrin subunit beta 1.
    
 0.594
ITGAV
Integrin subunit alpha V.
    
 0.592
ITGB3
Integrin subunit beta 3.
    
 0.592
ITGB5
Integrin subunit beta 5.
    
 0.589
ITGA1
Integrin subunit alpha 1.
     
 0.584
ITGB8
Integrin subunit beta 8.
    
  0.581
ITGA8
Integrin subunit alpha 8.
    
 0.580
ITGB6
Integrin subunit beta 6.
    
 0.576
CD44
CD44 molecule (Indian blood group).
    
  0.575
COL6A2
Collagen type VI alpha 2 chain.
  
0.575
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.