STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF13Ring finger protein 13. (388 aa)    
Predicted Functional Partners:
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.747
RPS27A
Ribosomal protein S27a.
    
  0.747
UBE2N
Ubiquitin conjugating enzyme E2 N.
    
 
 0.518
AP3S2
AP-3 complex subunit sigma-2.
    
 
 0.517
AP3S1
Adaptor related protein complex 3 subunit sigma 1.
    
 
 0.517
HSF2BP
Heat shock transcription factor 2 binding protein.
      
 0.507
NUS1
NUS1 dehydrodolichyl diphosphate synthase subunit.
    
 
 0.487
RNF128
Ring finger protein 128.
      
0.472
FZD6
Frizzled class receptor 6.
    
 
 0.469
ENSDNVP00000001070
annotation not available
    
  0.466
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.