STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMGXB4HMG-box containing 4. (650 aa)    
Predicted Functional Partners:
BPTF
Bromodomain PHD finger transcription factor.
    
  0.952
CECR2
Cat eye syndrome critical region protein 2.
    
 0.931
BAZ1B
Bromodomain adjacent to zinc finger domain 1B.
   
 
  0.920
SMARCA1
Probable global transcription activator SNF2L1.
    
 0.843
SMARCA5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
    
 0.835
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
  0.811
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
  0.811
FOXRED2
FAD dependent oxidoreductase domain containing 2.
      
 0.522
ENSDNVP00000007476
annotation not available
      
 0.520
ENSDNVP00000003806
annotation not available
    
 
 0.513
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.