STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB34RAB34, member RAS oncogene family. (517 aa)    
Predicted Functional Partners:
GDI2
GDP dissociation inhibitor 2.
   
 0.899
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
    
 0.866
ARL1
ADP ribosylation factor like GTPase 1.
   
 0.824
VPS53
VPS53 subunit of GARP complex.
    
 0.804
COG6
Component of oligomeric golgi complex 6.
   
 0.801
ENSDNVP00000006275
annotation not available
    
 0.793
VPS52
VPS52 subunit of GARP complex.
    
 0.791
VPS54
VPS54 subunit of GARP complex.
    
 0.753
RGP1
RGP1 homolog, RAB6A GEF complex partner 1.
    
 0.745
TMF1
TATA element modulatory factor 1.
    
 0.741
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.