STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLEC10Collectin subfamily member 10. (277 aa)    
Predicted Functional Partners:
COLEC11
Collectin subfamily member 11.
  
0.900
ENSDNVP00000025178
annotation not available
    
 0.815
MASP1
Mannan binding lectin serine peptidase 1.
    
 0.789
ENSDNVP00000003872
annotation not available
    
 0.725
C1S
Complement C1s.
    
 0.669
C1R
Complement C1r.
    
 0.668
ENSDNVP00000006241
annotation not available
  
 
   0.567
ENSDNVP00000005964
annotation not available
  
 
   0.566
TNN
Tenascin N.
    
 0.561
COL13A1
Collagen type XIII alpha 1 chain.
  
 
   0.560
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.