STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRABP1Cellular retinoic acid binding protein 1. (124 aa)    
Predicted Functional Partners:
RARA
Retinoic acid receptor alpha.
    
 0.608
RARB
Retinoic acid receptor beta.
    
 0.608
RXRG
Retinoid X receptor gamma.
    
 0.573
RXRA
Retinoid X receptor alpha.
    
 0.573
FABP2
Fatty acid binding protein 2.
  
  
0.546
FABP6
Fatty acid binding protein 6.
     
 0.529
FABP1
Fatty acid binding protein 1.
     
 0.507
PPARD
Peroxisome proliferator activated receptor delta.
    
 0.498
CYP26B1
Cytochrome P450 26B1.
     
 0.481
NR1D2
Nuclear receptor subfamily 1 group D member 2.
    
 0.475
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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