STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF185Ring finger protein 185. (193 aa)    
Predicted Functional Partners:
RNF121
Ring finger protein 121.
 
    
 0.884
RNF175
Ring finger protein 175.
 
    
 0.865
DERL1
Derlin 1.
    
 0.820
CFTR
CF transmembrane conductance regulator.
    
 0.800
DERL3
Derlin 3.
    
 0.760
ERLIN2
ER lipid raft associated 2.
   
 0.747
ERLIN1
Erlin-1-like.
   
 0.747
SEL1L
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
     
 0.741
RPS27A
Ribosomal protein S27a.
    
  0.702
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.694
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.