STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FTCDFormimidoyltransferase cyclodeaminase. (541 aa)    
Predicted Functional Partners:
MTHFR
Methylenetetrahydrofolate reductase.
    
 0.939
LOC112988207
Trifunctional purine biosynthetic protein adenosine-3-like.
    
 0.938
GART
Trifunctional purine biosynthetic protein adenosine-3.
    
 0.938
LOC112996047
5-formyltetrahydrofolate cyclo-ligase-like.
    
 0.923
AMDHD1
Amidohydrolase domain containing 1.
  
 
 0.922
MTHFD2L
Probable bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase 2.
    
 0.916
MTHFD2
annotation not available
    
 0.916
MTHFD1L
Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like.
    
 0.916
MTHFD1
Methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1.
    
 0.916
MTFMT
Mitochondrial methionyl-tRNA formyltransferase.
    
 0.906
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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