STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAPK1Death associated protein kinase 1. (1430 aa)    
Predicted Functional Partners:
BECN1
Beclin 1.
    
 0.856
MAPK1
Mitogen-activated protein kinase 1.
    
0.785
CALM2
Calmodulin 2.
   
 0.785
CALM1
Calmodulin 1.
   
 0.785
PLA2G4A
Phospholipase A2 group IVA.
    
 0.675
CALML4
Calmodulin like 4.
   
 0.649
MAPK14
Mitogen-activated protein kinase 14.
    
0.630
MAPK13
Mitogen-activated protein kinase 13.
    
0.630
MAPK12
Mitogen-activated protein kinase 12.
    
0.630
MAPK11
Mitogen-activated protein kinase 11.
    
0.630
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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