STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC3Tetratricopeptide repeat domain 3. (1973 aa)    
Predicted Functional Partners:
RPS27A
Ribosomal protein S27a.
    
 0.629
ZFAND4
Zinc finger AN1-type containing 4.
   
 0.619
ENSDNVP00000001070
annotation not available
    
 0.612
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.612
UBE2K
Ubiquitin conjugating enzyme E2 K.
    
 0.590
ENSDNVP00000006088
annotation not available
    
 0.562
ENSDNVP00000008258
annotation not available
    
 0.562
LGR4
Leucine rich repeat containing G protein-coupled receptor 4.
    
 0.562
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
    
 0.562
RXFP1
Relaxin family peptide receptor 1.
    
 0.562
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.