STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GABARAPL1Gamma-aminobutyric acid receptor-associated protein-like 1. (117 aa)    
Predicted Functional Partners:
NBR1
NBR1 autophagy cargo receptor.
   
 0.999
ATG3
Autophagy related 3.
  
 0.993
ATG7
Autophagy related 7.
   
 0.991
ATG4B
Autophagy related 4B cysteine peptidase.
   
 0.984
ATG14
Autophagy related 14.
    
 0.984
ATG4A
Autophagy related 4A cysteine peptidase.
   
 0.978
SQSTM1
Sequestosome 1.
   
 0.973
GABRG2
Gamma-aminobutyric acid type A receptor gamma2 subunit.
    
 0.951
ATG12
Autophagy related 12.
   
 0.950
ATG4C
Autophagy related 4C cysteine peptidase.
   
 0.948
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.