STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YIF1BYip1 interacting factor homolog B, membrane trafficking protein. (316 aa)    
Predicted Functional Partners:
MAEA
Macrophage erythroblast attacher.
   
 
 0.848
YIPF4
Yip1 domain family member 4.
   
 
 0.845
YIPF7
Yip1 domain family member 7.
   
 
 0.820
YIPF5
Yip1 domain family member 5.
   
 
 0.820
ENSDNVP00000016569
annotation not available
   
 
 0.820
RAB1A
RAB1A, member RAS oncogene family.
   
 
 0.733
STX6
Syntaxin 6.
   
 
 0.593
TPD52L2
TPD52 like 2.
      
 0.518
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
      
 0.514
RAB19
RAB19, member RAS oncogene family.
    
 
 0.511
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.