STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPP1R42Protein phosphatase 1 regulatory subunit 42. (360 aa)    
Predicted Functional Partners:
COPS4
COP9 signalosome subunit 4.
   
 0.989
COPS2
COP9 signalosome subunit 2.
   
 0.988
COPS3
COP9 signalosome subunit 3.
   
 0.986
COPS8
COP9 signalosome subunit 8.
   
 0.986
UBXN7
UBX domain protein 7.
   
 0.978
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.971
PSMD12
Proteasome 26S subunit, non-ATPase 12.
   
 0.956
CUL2
Cullin 2.
   
 0.953
EIF3E
Eukaryotic translation initiation factor 3 subunit E.
   
 0.938
ENSDNVP00000001320
annotation not available
   
 0.930
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.