STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112982149Probable tRNA methyltransferase 9B. (455 aa)    
Predicted Functional Partners:
NOB1
NIN1 (RPN12) binding protein 1 homolog.
   
 0.755
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
   
  0.719
TRMT11
tRNA methyltransferase 11 homolog.
   
 0.714
BYSL
Bystin like.
   
 0.662
SIGMAR1
Sigma non-opioid intracellular receptor 1.
   
 0.656
LSS
Lanosterol synthase.
    
 0.656
TSR1
TSR1 ribosome maturation factor.
   
  0.655
LTV1
LTV1 ribosome biogenesis factor.
   
 0.648
TRMT6
tRNA methyltransferase 6.
   
 0.647
IMP3
IMP U3 small nucleolar ribonucleoprotein 3.
   
  0.642
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.