STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DTD2D-aminoacyl-tRNA deacylase 2. (168 aa)    
Predicted Functional Partners:
YARS1
tyrosyl-tRNA synthetase 1.
     
 0.686
HDDC3
HD domain containing 3.
  
    0.460
G2E3
G2/M-phase specific E3 ubiquitin protein ligase.
      
 0.434
TARS1
threonyl-tRNA synthetase 1.
     
 0.425
CMPK2
Cytidine/uridine monophosphate kinase 2.
      
 0.416
ERP29
Endoplasmic reticulum protein 29.
      
 0.414
AMD1
Adenosylmethionine decarboxylase 1.
      
 0.412
SCFD1
Sec1 family domain containing 1.
      
 0.407
PPP6C
Protein phosphatase 6 catalytic subunit.
   
   0.404
YARS2
tyrosyl-tRNA synthetase 2.
     
 0.401
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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