STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112987651Protein BEAN1-like. (241 aa)    
Predicted Functional Partners:
MRPL55
Mitochondrial ribosomal protein L55.
      
 0.534
COQ8A
Coenzyme Q8A.
      
 0.521
TUBGCP4
Tubulin gamma complex associated protein 4.
      
 0.518
ENSDNVP00000007032
annotation not available
      
 0.510
ZNF608
Zinc finger protein 608.
      
 0.510
CMTM3
CKLF like MARVEL transmembrane domain containing 3.
      
 0.483
ATXN10
Ataxin 10.
      
 0.414
CCNDBP1
Cyclin D1 binding protein 1.
      
 0.414
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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