STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112996847Histone H3.3. (136 aa)    
Predicted Functional Partners:
KDM6A
Lysine demethylase 6A.
   
 0.964
LOC112996072
Histone H4.
 
 
 0.944
LOC112993420
Histone H2B 1/2/3/4/6-like.
 
 
 0.885
LOC112996070
Histone H2B 1/2/3/4/6.
 
 
 0.885
H2BE1
Late histone H2B.L4-like.
 
 
 0.880
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
 0.869
ENSDNVP00000004527
annotation not available
 
 
 0.866
SETD1B
SET domain containing 1B, histone lysine methyltransferase.
   
 0.862
DOT1L
DOT1 like histone lysine methyltransferase.
   
 0.860
LOC112980485
Histone H2B 5-like.
 
 
 0.856
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.