STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKD1Polycystin 1, transient receptor potential channel interacting. (4385 aa)    
Predicted Functional Partners:
PKD2
Polycystin 2, transient receptor potential cation channel.
    
0.998
PKD2L1
Polycystin 2 like 1, transient receptor potential cation channel.
    
0.955
PKD2L2
Polycystin 2 like 2, transient receptor potential cation channel.
    
0.830
MYOT
Myotilin.
    
 0.748
PKD1L2
Polycystin 1 like 2.
    
0.669
CCDC25
Coiled-coil domain containing 25.
    
 0.661
EXOC5
Exocyst complex component 5.
     
 0.646
EXOC4
Exocyst complex component 4.
     
 0.609
RAB3IP
RAB3A interacting protein.
     
 0.595
PKHD1
PKHD1 ciliary IPT domain containing fibrocystin/polyductin.
      
 0.588
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.