STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112988050Activated RNA polymerase II transcriptional coactivator p15-like. (123 aa)    
Predicted Functional Partners:
SYMPK
Symplekin.
    
 
 0.912
GTF2B
General transcription factor IIB.
    
 
 0.622
POLR2C
RNA polymerase II subunit C.
   
 
 0.466
C11orf58
Chromosome unknown C11orf58 homolog.
   
    0.463
TOP1
DNA topoisomerase I.
   
 
 0.451
TOP1MT
DNA topoisomerase I mitochondrial.
   
 
 0.451
POMP
Proteasome maturation protein.
   
  
 0.449
CSTF2
Cleavage stimulation factor subunit 2.
    
 
 0.430
ENSDNVP00000002023
annotation not available
    
 
 0.412
CTDP1
CTD phosphatase subunit 1.
    
 
 0.407
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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