STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RC3H2Ring finger and CCCH-type domains 2. (1191 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
   
   0.819
CNOT1
CCR4-NOT transcription complex subunit 1.
   
 
 0.783
RC3H1
Ring finger and CCCH-type domains 1.
  
 
  
0.724
HELZ
Helicase with zinc finger.
   
 
 0.699
AFF4
AF4/FMR2 family member 4.
   
 
 0.698
XRN1
5'-3' exoribonuclease 1.
   
 
 0.669
UBR1
Ubiquitin protein ligase E3 component n-recognin 1.
   
    0.657
ENSDNVP00000003806
annotation not available
   
    0.650
ENSDNVP00000003811
annotation not available
   
    0.650
ENSDNVP00000003825
annotation not available
   
    0.650
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.