STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZC3H11AZinc finger CCCH-type containing 11A. (808 aa)    
Predicted Functional Partners:
SARNP
SAP domain containing ribonucleoprotein.
    
 0.826
THOC1
THO complex 1.
    
 0.746
POLDIP3
DNA polymerase delta interacting protein 3.
     
 0.736
THOC5
THO complex 5.
    
 0.732
ZC3H13
Zinc finger CCCH-type containing 13.
   
 0.727
THOC2
THO complex 2.
   
 0.723
THOC7
THO complex 7.
    
 0.698
CHTOP
Chromatin target of PRMT1.
    
 0.675
EIF4A3
Eukaryotic translation initiation factor 4A3.
    
  0.667
ENSDNVP00000000667
annotation not available
     
 0.661
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.