STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASB18Ankyrin repeat and SOCS box containing 18. (444 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.699
ASB12
Ankyrin repeat and SOCS box containing 12.
  
 
 0.619
IFT81
Intraflagellar transport 81.
    
 0.584
IFT52
Intraflagellar transport 52.
    
 0.576
COMMD8
COMM domain containing 8.
   
  0.575
IFT22
Intraflagellar transport 22.
    
 0.569
IFT57
Intraflagellar transport 57.
    
 0.568
TRAF7
TNF receptor associated factor 7.
    
 0.567
IFT80
Intraflagellar transport 80.
    
 0.565
TTC30B
Tetratricopeptide repeat domain 30B.
    
 0.565
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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