STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDZRN3PDZ domain containing ring finger 3. (780 aa)    
Predicted Functional Partners:
BIRC6
Baculoviral IAP repeat containing 6.
   
 0.883
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.869
RPS27A
Ribosomal protein S27a.
    
 0.820
RNASEL
Ribonuclease L.
    
 0.799
ZFAND4
Zinc finger AN1-type containing 4.
    
 0.786
RIPK4
Receptor interacting serine/threonine kinase 4.
    
 0.770
UBE2V1
Ubiquitin-conjugating enzyme E2 variant 1.
    
 0.763
TRADD
TNFRSF1A associated via death domain.
    
 0.730
ENSDNVP00000001070
annotation not available
    
  0.699
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.699
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.