STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBX4Chromobox 4. (460 aa)    
Predicted Functional Partners:
CBX8
Chromobox 8.
  
 
 0.989
CBX2
Chromobox 2.
  
 
 0.981
CBX6
Chromobox 6.
    
 0.964
PCGF1
Polycomb group ring finger 1.
    
 0.963
CBX7
Chromobox 7.
 
   
 0.961
PCGF6
Polycomb group ring finger 6.
    
 0.958
PCGF5
Polycomb group ring finger 5.
    
 0.953
PCGF3
Polycomb group ring finger 3.
    
 0.953
EED
Embryonic ectoderm development.
    
 0.951
BCOR
BCL6 corepressor.
    
 0.943
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.