STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF44Ring finger protein 44. (442 aa)    
Predicted Functional Partners:
RPS27A
Ribosomal protein S27a.
    
 0.883
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.869
UBE2K
Ubiquitin conjugating enzyme E2 K.
    
 0.786
UBE2N
Ubiquitin conjugating enzyme E2 N.
   
 0.706
UBE2V2
Ubiquitin conjugating enzyme E2 V2.
   
 0.656
SMAD7
SMAD family member 7.
   
 0.652
SMAD6
SMAD family member 6.
   
 0.651
ENSDNVP00000024883
annotation not available
   
 0.651
ZFAND4
Zinc finger AN1-type containing 4.
   
 0.619
ENSDNVP00000001070
annotation not available
    
 0.612
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.