STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PATJPATJ crumbs cell polarity complex component. (1895 aa)    
Predicted Functional Partners:
MPP5
Membrane palmitoylated protein 5.
    
 0.965
AMOT
Angiomotin.
    
 0.943
AMOTL1
Angiomotin like 1.
    
 0.905
TJP3
Tight junction protein 3.
    
0.885
PARD3
Par-3 family cell polarity regulator.
    
0.883
AMOTL2
Angiomotin like 2.
   
 0.873
ARHGEF18
Rho/Rac guanine nucleotide exchange factor 18.
   
 0.859
PLCB4
Phospholipase C beta 4.
   
  0.808
CRB1
Crumbs cell polarity complex component 1.
    
 0.782
MAGI3
Membrane associated guanylate kinase, WW and PDZ domain containing 3.
    
0.773
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.