STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPWD1Peptidylprolyl isomerase domain and WD repeat containing 1. (630 aa)    
Predicted Functional Partners:
PPIL1
Peptidylprolyl isomerase like 1.
  
0.993
CDC40
Cell division cycle 40.
   
  0.992
ENSDNVP00000000667
annotation not available
    
  0.976
CCDC12
Coiled-coil domain containing 12.
     
 0.974
PPIL3
Peptidylprolyl isomerase like 3.
  
0.970
MTREX
Mtr4 exosome RNA helicase.
   
 0.945
SYF2
SYF2 pre-mRNA splicing factor.
    
 0.935
PPIL2
Peptidylprolyl isomerase like 2.
  
0.930
PRPF8
pre-mRNA processing factor 8.
    
 
 0.906
DHX38
DEAH-box helicase 38.
   
  0.905
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.