STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATG16L1Autophagy related 16 like 1. (592 aa)    
Predicted Functional Partners:
ATG5
Autophagy related 5.
   
 0.999
ATG12
Autophagy related 12.
    
 0.998
RAB33B
RAB33B, member RAS oncogene family.
    
 0.995
WIPI2
WD repeat domain, phosphoinositide interacting 2.
   
 0.994
ATG3
Autophagy related 3.
   
 0.993
WIPI1
WD repeat domain, phosphoinositide interacting 1.
   
 0.989
RB1CC1
RB1 inducible coiled-coil 1.
   
 0.980
WDFY3
WD repeat and FYVE domain containing 3.
    
 0.962
RAB33A
RAB33A, member RAS oncogene family.
    
 0.949
NOD1
Nucleotide binding oligomerization domain containing 1.
    
 0.944
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.