STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNRPASmall nuclear ribonucleoprotein polypeptide A. (253 aa)    
Predicted Functional Partners:
SNRPA1
Small nuclear ribonucleoprotein polypeptide A.
   
 0.988
SNRPC
Small nuclear ribonucleoprotein polypeptide C.
   
 0.988
SNRPD1
Small nuclear ribonucleoprotein D1 polypeptide.
   
 0.986
ENSDNVP00000019546
annotation not available
   
 0.985
SNRNP35
Small nuclear ribonucleoprotein U11/U12 subunit 35.
   
 0.985
SNRPG
Small nuclear ribonucleoprotein polypeptide G.
   
 0.984
SNRPD3
Small nuclear ribonucleoprotein D3 polypeptide.
   
 0.984
PRPF6
pre-mRNA processing factor 6.
   
 0.983
ENSDNVP00000016351
annotation not available
   
 0.982
PHF5A
PHD finger protein 5A.
   
 0.981
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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